Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Smg1Q8BKX6 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Smg1Q8BKX6 Gm2399-201ENSMUST00000104944 225 ntBASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Gm7461-201ENSMUST00000058918 827 ntBASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Smg1Q8BKX6 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Smg1Q8BKX6 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Gm13559-201ENSMUST00000120476 863 ntBASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Smg1Q8BKX6 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Smg1Q8BKX6 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Smg1Q8BKX6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Gm9103-201ENSMUST00000119371 405 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Gm11539-201ENSMUST00000119837 557 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Gm13436-201ENSMUST00000120418 567 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Smg1Q8BKX6 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.06■□□□□ 0.16
Smg1Q8BKX6 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms