Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.34■□□□□ 0.53
Trim50Q810I2 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.34■□□□□ 0.53
Trim50Q810I2 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim50Q810I2 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim50Q810I2 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim50Q810I2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Trim50Q810I2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim50Q810I2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.33■□□□□ 0.53
Trim50Q810I2 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim50Q810I2 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Trim50Q810I2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim50Q810I2 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.33■□□□□ 0.52
Trim50Q810I2 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Gm10493-201ENSMUST00000097270 612 ntBASIC18.33■□□□□ 0.52
Trim50Q810I2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.33■□□□□ 0.52
Trim50Q810I2 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim50Q810I2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
Trim50Q810I2 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim50Q810I2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim50Q810I2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim50Q810I2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.31■□□□□ 0.52
Trim50Q810I2 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim50Q810I2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim50Q810I2 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trim50Q810I2 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim50Q810I2 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.3■□□□□ 0.52
Trim50Q810I2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.3■□□□□ 0.52
Trim50Q810I2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.3■□□□□ 0.52
Trim50Q810I2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.3■□□□□ 0.52
Trim50Q810I2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Trim50Q810I2 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC18.3■□□□□ 0.52
Trim50Q810I2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trim50Q810I2 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim50Q810I2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Trim50Q810I2 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.29■□□□□ 0.52
Trim50Q810I2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Trim50Q810I2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.29■□□□□ 0.52
Trim50Q810I2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trim50Q810I2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.28■□□□□ 0.52
Trim50Q810I2 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.28■□□□□ 0.52
Trim50Q810I2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trim50Q810I2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trim50Q810I2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Trim50Q810I2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim50Q810I2 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trim50Q810I2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms