Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Gm7860-201ENSMUST00000121190 879 ntBASIC20.12■□□□□ 0.81
Nucks1Q80XU3 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Nucks1Q80XU3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Gm6139-201ENSMUST00000079261 882 ntBASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nucks1Q80XU3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Nucks1Q80XU3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nucks1Q80XU3 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Gm26833-201ENSMUST00000180899 440 ntBASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nucks1Q80XU3 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nucks1Q80XU3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Nucks1Q80XU3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nucks1Q80XU3 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Gm40848-201ENSMUST00000221998 324 ntBASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nucks1Q80XU3 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nucks1Q80XU3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nucks1Q80XU3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.06■□□□□ 0.8
Nucks1Q80XU3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nucks1Q80XU3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Nucks1Q80XU3 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Nucks1Q80XU3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Nucks1Q80XU3 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms