Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.96■□□□□ 0.47
Vrk1Q80X41 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
Vrk1Q80X41 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Vrk1Q80X41 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Vrk1Q80X41 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.95■□□□□ 0.46
Vrk1Q80X41 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Vrk1Q80X41 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.95■□□□□ 0.46
Vrk1Q80X41 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vrk1Q80X41 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Gm10812-201ENSMUST00000099864 546 ntBASIC17.94■□□□□ 0.46
Vrk1Q80X41 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Vrk1Q80X41 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vrk1Q80X41 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vrk1Q80X41 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vrk1Q80X41 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Vrk1Q80X41 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.93■□□□□ 0.46
Vrk1Q80X41 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Vrk1Q80X41 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Vrk1Q80X41 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vrk1Q80X41 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vrk1Q80X41 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vrk1Q80X41 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Vrk1Q80X41 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Vrk1Q80X41 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Vrk1Q80X41 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Vrk1Q80X41 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.9■□□□□ 0.46
Vrk1Q80X41 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Vrk1Q80X41 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.9■□□□□ 0.46
Vrk1Q80X41 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.89■□□□□ 0.45
Vrk1Q80X41 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Vrk1Q80X41 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vrk1Q80X41 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Vrk1Q80X41 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Vrk1Q80X41 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms