Protein–RNA interactions for Protein: Q80TY5

Vps13b, Vacuolar protein sorting-associated protein 13B, mousemouse

Predictions only

Length 3,993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13bQ80TY5 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Vps13bQ80TY5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Gm23634-201ENSMUST00000175071 91 ntBASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Gm32051-202ENSMUST00000197905 2385 ntBASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Vps13bQ80TY5 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Gm9103-201ENSMUST00000119371 405 ntBASIC11.38□□□□□ -0.59
Vps13bQ80TY5 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Vps13bQ80TY5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 AC159205.6-201ENSMUST00000224935 887 ntBASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Gm6345-202ENSMUST00000180900 204 ntBASIC11.37□□□□□ -0.59
Vps13bQ80TY5 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Vps13bQ80TY5 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 AA414768-201ENSMUST00000121924 1257 ntBASIC11.36□□□□□ -0.59
Vps13bQ80TY5 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Vps13bQ80TY5 Ank2-226ENSMUST00000189368 339 ntBASIC11.35□□□□□ -0.59
Vps13bQ80TY5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Vps13bQ80TY5 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Gm33142-201ENSMUST00000193913 867 ntBASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Gm30025-201ENSMUST00000218555 728 ntBASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Vps13bQ80TY5 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps13bQ80TY5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Vps13bQ80TY5 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
Vps13bQ80TY5 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13bQ80TY5 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Vps13bQ80TY5 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Vps13bQ80TY5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms