Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Ush1gQ80T11 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1gQ80T11 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1gQ80T11 Gm7860-201ENSMUST00000121190 879 ntBASIC20.6■□□□□ 0.89
Ush1gQ80T11 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1gQ80T11 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1gQ80T11 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ush1gQ80T11 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.59■□□□□ 0.89
Ush1gQ80T11 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ush1gQ80T11 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.58■□□□□ 0.89
Ush1gQ80T11 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ush1gQ80T11 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
Ush1gQ80T11 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ush1gQ80T11 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ush1gQ80T11 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ush1gQ80T11 Gm22325-201ENSMUST00000158904 308 ntBASIC20.57■□□□□ 0.88
Ush1gQ80T11 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ush1gQ80T11 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.57■□□□□ 0.88
Ush1gQ80T11 Gm44672-201ENSMUST00000206944 1098 ntBASIC20.57■□□□□ 0.88
Ush1gQ80T11 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.57■□□□□ 0.88
Ush1gQ80T11 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ush1gQ80T11 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ush1gQ80T11 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Gm26524-201ENSMUST00000192339 390 ntBASIC20.56■□□□□ 0.88
Ush1gQ80T11 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ush1gQ80T11 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Rab3c-203ENSMUST00000224180 967 ntBASIC20.55■□□□□ 0.88
Ush1gQ80T11 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ush1gQ80T11 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ush1gQ80T11 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ush1gQ80T11 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Ush1gQ80T11 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ush1gQ80T11 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ush1gQ80T11 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ush1gQ80T11 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ush1gQ80T11 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ush1gQ80T11 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.87
Ush1gQ80T11 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ush1gQ80T11 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ush1gQ80T11 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms