Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
Prpf38bQ80SY5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Gm6211-202ENSMUST00000167849 925 ntBASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Prpf38bQ80SY5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Arhgef33-211ENSMUST00000225658 473 ntBASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Prpf38bQ80SY5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38bQ80SY5 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Prpf38bQ80SY5 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38bQ80SY5 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38bQ80SY5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Prpf38bQ80SY5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38bQ80SY5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Prpf38bQ80SY5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.58■□□□□ 0.73
Prpf38bQ80SY5 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Prpf38bQ80SY5 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Prpf38bQ80SY5 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Gm13146-201ENSMUST00000118508 780 ntBASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.56■□□□□ 0.72
Prpf38bQ80SY5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Prpf38bQ80SY5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Prpf38bQ80SY5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Prpf38bQ80SY5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms