Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Gm6211-202ENSMUST00000167849 925 ntBASIC19.42■□□□□ 0.7
Cspg5Q71M36 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Gm20049-201ENSMUST00000219950 730 ntBASIC19.42■□□□□ 0.7
Cspg5Q71M36 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cspg5Q71M36 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Cspg5Q71M36 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cspg5Q71M36 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cspg5Q71M36 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Cspg5Q71M36 Gm7290-201ENSMUST00000104990 617 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gm13146-201ENSMUST00000118508 780 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gm12918-201ENSMUST00000120234 636 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gm15710-201ENSMUST00000121821 636 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gm37856-201ENSMUST00000191634 999 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gm5075-201ENSMUST00000196916 622 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Trmt13-210ENSMUST00000198454 880 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.39■□□□□ 0.69
Cspg5Q71M36 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cspg5Q71M36 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cspg5Q71M36 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.37■□□□□ 0.69
Cspg5Q71M36 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.37■□□□□ 0.69
Cspg5Q71M36 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cspg5Q71M36 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms