Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Snrnp40Q6PE01 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Snrnp40Q6PE01 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Snrnp40Q6PE01 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Snrnp40Q6PE01 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Gm9987-201ENSMUST00000069768 567 ntBASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.6■□□□□ 0.25
Snrnp40Q6PE01 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Snrnp40Q6PE01 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp40Q6PE01 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp40Q6PE01 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Snrnp40Q6PE01 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Snrnp40Q6PE01 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.58■□□□□ 0.24
Snrnp40Q6PE01 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Snrnp40Q6PE01 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Snrnp40Q6PE01 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.58■□□□□ 0.24
Snrnp40Q6PE01 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Snrnp40Q6PE01 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp40Q6PE01 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp40Q6PE01 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Snrnp40Q6PE01 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms