Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.97■■□□□ 1.11
Smarcc2Q6PDG5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Reep4-203ENSMUST00000226563 1444 ntBASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Smarcc2Q6PDG5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Gm10033-202ENSMUST00000211874 928 ntBASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Smarcc2Q6PDG5 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Smarcc2Q6PDG5 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Smarcc2Q6PDG5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Gm13234-201ENSMUST00000120010 747 ntBASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Smarcc2Q6PDG5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 AV356131-201ENSMUST00000206201 750 ntBASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Smarcc2Q6PDG5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
Smarcc2Q6PDG5 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcc2Q6PDG5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcc2Q6PDG5 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcc2Q6PDG5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcc2Q6PDG5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Smarcc2Q6PDG5 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.89■■□□□ 1.09
Smarcc2Q6PDG5 Gm10849-201ENSMUST00000100397 618 ntBASIC21.89■■□□□ 1.09
Smarcc2Q6PDG5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms