Protein–RNA interactions for Protein: Q6P542

Abcf1, ATP-binding cassette sub-family F member 1, mousemouse

Known RBP Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcf1Q6P542 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Abcf1Q6P542 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Abcf1Q6P542 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.01■□□□□ 0.95
Abcf1Q6P542 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Abcf1Q6P542 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC21■□□□□ 0.95
Abcf1Q6P542 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Abcf1Q6P542 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC21■□□□□ 0.95
Abcf1Q6P542 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Gm43017-201ENSMUST00000198296 752 ntBASIC20.99■□□□□ 0.95
Abcf1Q6P542 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
Abcf1Q6P542 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.99■□□□□ 0.95
Abcf1Q6P542 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Gm12251-201ENSMUST00000117893 792 ntBASIC20.98■□□□□ 0.95
Abcf1Q6P542 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Rarb-207ENSMUST00000225921 2756 ntBASIC20.98■□□□□ 0.95
Abcf1Q6P542 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Abcf1Q6P542 Gm5953-201ENSMUST00000220644 2616 ntBASIC20.97■□□□□ 0.95
Abcf1Q6P542 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Abcf1Q6P542 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Abcf1Q6P542 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Gm43173-201ENSMUST00000202246 593 ntBASIC20.95■□□□□ 0.94
Abcf1Q6P542 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Abcf1Q6P542 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Abcf1Q6P542 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Abcf1Q6P542 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Abcf1Q6P542 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms