Protein–RNA interactions for Protein: Q6DFV6

Fndc3c1, Fibronectin type III domain containing protein 3C1, mousemouse

Predictions only

Length 1,356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc3c1Q6DFV6 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fndc3c1Q6DFV6 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Fndc3c1Q6DFV6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Fndc3c1Q6DFV6 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Fndc3c1Q6DFV6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fndc3c1Q6DFV6 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fndc3c1Q6DFV6 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Fndc3c1Q6DFV6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Fndc3c1Q6DFV6 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Gm10819-201ENSMUST00000099988 561 ntBASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
Fndc3c1Q6DFV6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 AC140264.2-202ENSMUST00000218746 817 ntBASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Fndc3c1Q6DFV6 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Gm5417-201ENSMUST00000079706 384 ntBASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Fndc3c1Q6DFV6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Fndc3c1Q6DFV6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.29■■□□□ 1
Fndc3c1Q6DFV6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Fndc3c1Q6DFV6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.27■■□□□ 1
Fndc3c1Q6DFV6 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Fndc3c1Q6DFV6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fndc3c1Q6DFV6 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Fndc3c1Q6DFV6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Fndc3c1Q6DFV6 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Fndc3c1Q6DFV6 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC21.25■□□□□ 0.99
Fndc3c1Q6DFV6 Alkbh1-212ENSMUST00000185301 408 ntBASIC21.25■□□□□ 0.99
Fndc3c1Q6DFV6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms