Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Six1Q62231 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.37■□□□□ 0.69
Six1Q62231 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
Six1Q62231 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.37■□□□□ 0.69
Six1Q62231 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.37■□□□□ 0.69
Six1Q62231 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Six1Q62231 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Six1Q62231 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six1Q62231 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Six1Q62231 Gm42939-201ENSMUST00000197514 2205 ntBASIC19.36■□□□□ 0.69
Six1Q62231 Gm8493-201ENSMUST00000196881 489 ntBASIC19.36■□□□□ 0.69
Six1Q62231 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Six1Q62231 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.36■□□□□ 0.69
Six1Q62231 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six1Q62231 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Six1Q62231 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Six1Q62231 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Six1Q62231 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.35■□□□□ 0.69
Six1Q62231 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Six1Q62231 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.35■□□□□ 0.69
Six1Q62231 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Six1Q62231 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.34■□□□□ 0.69
Six1Q62231 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Six1Q62231 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six1Q62231 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six1Q62231 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six1Q62231 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Six1Q62231 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six1Q62231 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.33■□□□□ 0.69
Six1Q62231 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Six1Q62231 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.33■□□□□ 0.68
Six1Q62231 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Six1Q62231 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC19.32■□□□□ 0.68
Six1Q62231 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Six1Q62231 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Six1Q62231 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Six1Q62231 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Six1Q62231 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.32■□□□□ 0.68
Six1Q62231 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.32■□□□□ 0.68
Six1Q62231 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Six1Q62231 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.31■□□□□ 0.68
Six1Q62231 Gm27454-201ENSMUST00000185090 204 ntBASIC19.31■□□□□ 0.68
Six1Q62231 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Gm6139-201ENSMUST00000079261 882 ntBASIC19.31■□□□□ 0.68
Six1Q62231 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Six1Q62231 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.31■□□□□ 0.68
Six1Q62231 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Six1Q62231 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Six1Q62231 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six1Q62231 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six1Q62231 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Six1Q62231 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Six1Q62231 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms