Protein–RNA interactions for Protein: Q62186

Ssr4, Translocon-associated protein subunit delta, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr4Q62186 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Ssr4Q62186 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.27■□□□□ 0.68
Ssr4Q62186 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.27■□□□□ 0.68
Ssr4Q62186 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ssr4Q62186 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Ssr4Q62186 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr4Q62186 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ssr4Q62186 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Ssr4Q62186 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Ssr4Q62186 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.26■□□□□ 0.67
Ssr4Q62186 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ssr4Q62186 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Ssr4Q62186 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.25■□□□□ 0.67
Ssr4Q62186 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssr4Q62186 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Gm15565-201ENSMUST00000118890 427 ntBASIC19.25■□□□□ 0.67
Ssr4Q62186 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssr4Q62186 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.25■□□□□ 0.67
Ssr4Q62186 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Ssr4Q62186 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.25■□□□□ 0.67
Ssr4Q62186 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ssr4Q62186 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssr4Q62186 Flg-201ENSMUST00000050758 1488 ntBASIC19.24■□□□□ 0.67
Ssr4Q62186 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr4Q62186 Gm11643-201ENSMUST00000119578 864 ntBASIC19.24■□□□□ 0.67
Ssr4Q62186 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr4Q62186 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssr4Q62186 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr4Q62186 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr4Q62186 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ssr4Q62186 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ssr4Q62186 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.23■□□□□ 0.67
Ssr4Q62186 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ssr4Q62186 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.22■□□□□ 0.67
Ssr4Q62186 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr4Q62186 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr4Q62186 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.22■□□□□ 0.67
Ssr4Q62186 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.22■□□□□ 0.67
Ssr4Q62186 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr4Q62186 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr4Q62186 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ssr4Q62186 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ssr4Q62186 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Ssr4Q62186 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.21■□□□□ 0.67
Ssr4Q62186 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.21■□□□□ 0.67
Ssr4Q62186 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ssr4Q62186 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.21■□□□□ 0.67
Ssr4Q62186 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ssr4Q62186 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC19.2■□□□□ 0.66
Ssr4Q62186 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Ssr4Q62186 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms