Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Foxc1Q61572 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.73□□□□□ -0.21
Foxc1Q61572 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC13.73□□□□□ -0.21
Foxc1Q61572 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Foxc1Q61572 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Foxc1Q61572 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Foxc1Q61572 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC13.72□□□□□ -0.21
Foxc1Q61572 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Foxc1Q61572 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC13.72□□□□□ -0.21
Foxc1Q61572 Gm9988-201ENSMUST00000069786 435 ntBASIC13.72□□□□□ -0.21
Foxc1Q61572 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.72□□□□□ -0.21
Foxc1Q61572 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Foxc1Q61572 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Foxc1Q61572 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.71□□□□□ -0.21
Foxc1Q61572 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.71□□□□□ -0.21
Foxc1Q61572 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Foxc1Q61572 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxc1Q61572 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Foxc1Q61572 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Foxc1Q61572 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC13.7□□□□□ -0.22
Foxc1Q61572 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Foxc1Q61572 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC13.69□□□□□ -0.22
Foxc1Q61572 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.69□□□□□ -0.22
Foxc1Q61572 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC13.69□□□□□ -0.22
Foxc1Q61572 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 AV356131-201ENSMUST00000206201 750 ntBASIC13.69□□□□□ -0.22
Foxc1Q61572 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Foxc1Q61572 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Foxc1Q61572 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Foxc1Q61572 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Gm37179-201ENSMUST00000194862 823 ntBASIC13.68□□□□□ -0.22
Foxc1Q61572 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Foxc1Q61572 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC13.68□□□□□ -0.22
Foxc1Q61572 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms