Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hif1aQ61221 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Hif1aQ61221 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hif1aQ61221 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hif1aQ61221 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.96■□□□□ 0.63
Hif1aQ61221 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hif1aQ61221 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Hif1aQ61221 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Gm9847-201ENSMUST00000052528 599 ntBASIC18.95■□□□□ 0.62
Hif1aQ61221 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Hif1aQ61221 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.95■□□□□ 0.62
Hif1aQ61221 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Hif1aQ61221 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Hif1aQ61221 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC18.94■□□□□ 0.62
Hif1aQ61221 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Hif1aQ61221 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Hif1aQ61221 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.94■□□□□ 0.62
Hif1aQ61221 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Hif1aQ61221 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Hif1aQ61221 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Hif1aQ61221 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Hif1aQ61221 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Hif1aQ61221 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.92■□□□□ 0.62
Hif1aQ61221 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.92■□□□□ 0.62
Hif1aQ61221 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Hif1aQ61221 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.92■□□□□ 0.62
Hif1aQ61221 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Hif1aQ61221 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Hif1aQ61221 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.9■□□□□ 0.62
Hif1aQ61221 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.9■□□□□ 0.62
Hif1aQ61221 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.9■□□□□ 0.62
Hif1aQ61221 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Hif1aQ61221 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Hif1aQ61221 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Hif1aQ61221 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Hif1aQ61221 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Hif1aQ61221 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms