Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.78■■□□□ 1.08
Scnn1aQ61180 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.78■■□□□ 1.08
Scnn1aQ61180 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scnn1aQ61180 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scnn1aQ61180 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Scnn1aQ61180 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Scnn1aQ61180 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Scnn1aQ61180 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Scnn1aQ61180 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.76■■□□□ 1.07
Scnn1aQ61180 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Gm8520-201ENSMUST00000186517 868 ntBASIC21.76■■□□□ 1.07
Scnn1aQ61180 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Scnn1aQ61180 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Trmt13-210ENSMUST00000198454 880 ntBASIC21.75■■□□□ 1.07
Scnn1aQ61180 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21.75■■□□□ 1.07
Scnn1aQ61180 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Scnn1aQ61180 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Scnn1aQ61180 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Scnn1aQ61180 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Gm22240-201ENSMUST00000175225 82 ntBASIC21.72■■□□□ 1.07
Scnn1aQ61180 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.72■■□□□ 1.07
Scnn1aQ61180 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.72■■□□□ 1.07
Scnn1aQ61180 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Scnn1aQ61180 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Gm44549-201ENSMUST00000208351 577 ntBASIC21.71■■□□□ 1.07
Scnn1aQ61180 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Scnn1aQ61180 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Gm12896-201ENSMUST00000118430 226 ntBASIC21.7■■□□□ 1.06
Scnn1aQ61180 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Gm27275-201ENSMUST00000184318 272 ntBASIC21.7■■□□□ 1.06
Scnn1aQ61180 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC21.7■■□□□ 1.06
Scnn1aQ61180 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Scnn1aQ61180 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms