Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.65□□□□□ -0.06
Trav15-1-dv6-1Q5R1D2 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cap2-205ENSMUST00000225824 1634 ntBASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gm42911-201ENSMUST00000199360 1630 ntBASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Dmtn-210ENSMUST00000228824 2377 ntBASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Trav15-1-dv6-1Q5R1D2 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms