Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Urb1Q571H0 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Urb1Q571H0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Urb1Q571H0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Urb1Q571H0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.29■□□□□ 0.36
Urb1Q571H0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Urb1Q571H0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.29■□□□□ 0.36
Urb1Q571H0 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.29■□□□□ 0.36
Urb1Q571H0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Urb1Q571H0 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Urb1Q571H0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Urb1Q571H0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.28■□□□□ 0.36
Urb1Q571H0 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Urb1Q571H0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Urb1Q571H0 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Urb1Q571H0 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Urb1Q571H0 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.27■□□□□ 0.35
Urb1Q571H0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Urb1Q571H0 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Urb1Q571H0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.26■□□□□ 0.35
Urb1Q571H0 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Urb1Q571H0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Urb1Q571H0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.26■□□□□ 0.35
Urb1Q571H0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.25■□□□□ 0.35
Urb1Q571H0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Urb1Q571H0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Mir5122-201ENSMUST00000175004 89 ntBASIC17.24■□□□□ 0.35
Urb1Q571H0 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Urb1Q571H0 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Urb1Q571H0 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Urb1Q571H0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Urb1Q571H0 Gm15378-201ENSMUST00000121894 207 ntBASIC17.24■□□□□ 0.35
Urb1Q571H0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Gm10819-201ENSMUST00000099988 561 ntBASIC17.24■□□□□ 0.35
Urb1Q571H0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.24■□□□□ 0.35
Urb1Q571H0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Urb1Q571H0 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.23■□□□□ 0.35
Urb1Q571H0 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.23■□□□□ 0.35
Urb1Q571H0 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Urb1Q571H0 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.23■□□□□ 0.35
Urb1Q571H0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Urb1Q571H0 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Urb1Q571H0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms