Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.36■□□□□ 0.69
Trim80Q3V061 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.36■□□□□ 0.69
Trim80Q3V061 Gm43137-201ENSMUST00000198052 594 ntBASIC19.36■□□□□ 0.69
Trim80Q3V061 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Trim80Q3V061 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trim80Q3V061 Gm5953-201ENSMUST00000220644 2616 ntBASIC19.36■□□□□ 0.69
Trim80Q3V061 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.35■□□□□ 0.69
Trim80Q3V061 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trim80Q3V061 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trim80Q3V061 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim80Q3V061 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trim80Q3V061 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Trim80Q3V061 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.34■□□□□ 0.69
Trim80Q3V061 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trim80Q3V061 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Trim80Q3V061 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trim80Q3V061 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim80Q3V061 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim80Q3V061 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trim80Q3V061 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.33■□□□□ 0.68
Trim80Q3V061 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.33■□□□□ 0.68
Trim80Q3V061 Mir7075-201ENSMUST00000184187 82 ntBASIC19.33■□□□□ 0.68
Trim80Q3V061 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Trim80Q3V061 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.33■□□□□ 0.68
Trim80Q3V061 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trim80Q3V061 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Trim80Q3V061 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.32■□□□□ 0.68
Trim80Q3V061 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC19.32■□□□□ 0.68
Trim80Q3V061 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Trim80Q3V061 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trim80Q3V061 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Gm7143-201ENSMUST00000222811 859 ntBASIC19.31■□□□□ 0.68
Trim80Q3V061 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trim80Q3V061 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trim80Q3V061 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim80Q3V061 Mir6236-201ENSMUST00000184437 123 ntBASIC19.3■□□□□ 0.68
Trim80Q3V061 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim80Q3V061 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.3■□□□□ 0.68
Trim80Q3V061 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.3■□□□□ 0.68
Trim80Q3V061 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.3■□□□□ 0.68
Trim80Q3V061 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.3■□□□□ 0.68
Trim80Q3V061 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trim80Q3V061 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms