Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Cks1brtQ3UNC9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
Cks1brtQ3UNC9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cks1brtQ3UNC9 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cks1brtQ3UNC9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cks1brtQ3UNC9 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cks1brtQ3UNC9 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms