Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cln6Q3U466 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Gm45102-201ENSMUST00000207427 857 ntBASIC15.99■□□□□ 0.15
Cln6Q3U466 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Cln6Q3U466 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Cln6Q3U466 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cln6Q3U466 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.98■□□□□ 0.15
Cln6Q3U466 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cln6Q3U466 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Cln6Q3U466 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Cln6Q3U466 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Cln6Q3U466 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Cln6Q3U466 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.97■□□□□ 0.15
Cln6Q3U466 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
Cln6Q3U466 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.97■□□□□ 0.15
Cln6Q3U466 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.97■□□□□ 0.15
Cln6Q3U466 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Cln6Q3U466 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cln6Q3U466 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC15.96■□□□□ 0.15
Cln6Q3U466 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Cln6Q3U466 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cln6Q3U466 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Cln6Q3U466 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cln6Q3U466 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.96■□□□□ 0.15
Cln6Q3U466 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cln6Q3U466 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Cln6Q3U466 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Cln6Q3U466 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Cln6Q3U466 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Cln6Q3U466 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.96■□□□□ 0.14
Cln6Q3U466 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cln6Q3U466 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Cln6Q3U466 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC15.95■□□□□ 0.14
Cln6Q3U466 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.95■□□□□ 0.14
Cln6Q3U466 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.95■□□□□ 0.14
Cln6Q3U466 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Cln6Q3U466 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Cln6Q3U466 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
Cln6Q3U466 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cln6Q3U466 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Cln6Q3U466 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Cln6Q3U466 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms