Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.07□□□□□ -0.16
Hspg2Q05793 AC152827.1-201ENSMUST00000221143 2189 ntBASIC14.07□□□□□ -0.16
Hspg2Q05793 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 H2-K2-201ENSMUST00000174250 1049 ntBASIC14.07□□□□□ -0.16
Hspg2Q05793 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Hspg2Q05793 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.07□□□□□ -0.16
Hspg2Q05793 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hspg2Q05793 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hspg2Q05793 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hspg2Q05793 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.06□□□□□ -0.16
Hspg2Q05793 Gm7860-201ENSMUST00000121190 879 ntBASIC14.06□□□□□ -0.16
Hspg2Q05793 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.06□□□□□ -0.16
Hspg2Q05793 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Hspg2Q05793 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Hspg2Q05793 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Hspg2Q05793 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Hspg2Q05793 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.05□□□□□ -0.16
Hspg2Q05793 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hspg2Q05793 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hspg2Q05793 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.05□□□□□ -0.16
Hspg2Q05793 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.05□□□□□ -0.16
Hspg2Q05793 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Hspg2Q05793 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Hspg2Q05793 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Hspg2Q05793 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Hspg2Q05793 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Hspg2Q05793 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.04□□□□□ -0.16
Hspg2Q05793 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.04□□□□□ -0.16
Hspg2Q05793 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC14.04□□□□□ -0.16
Hspg2Q05793 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Hspg2Q05793 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Hspg2Q05793 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.04□□□□□ -0.16
Hspg2Q05793 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Gm14464-201ENSMUST00000119658 1254 ntBASIC14.04□□□□□ -0.16
Hspg2Q05793 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.04□□□□□ -0.16
Hspg2Q05793 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Hspg2Q05793 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Gm25925-201ENSMUST00000158314 306 ntBASIC14.03□□□□□ -0.16
Hspg2Q05793 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Hspg2Q05793 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.02□□□□□ -0.16
Hspg2Q05793 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Hspg2Q05793 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.02□□□□□ -0.17
Hspg2Q05793 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.02□□□□□ -0.17
Hspg2Q05793 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hspg2Q05793 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.02□□□□□ -0.17
Hspg2Q05793 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Hspg2Q05793 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Hspg2Q05793 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Hspg2Q05793 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.01□□□□□ -0.17
Hspg2Q05793 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.01□□□□□ -0.17
Hspg2Q05793 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Hspg2Q05793 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.01□□□□□ -0.17
Hspg2Q05793 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Hspg2Q05793 Gm8668-201ENSMUST00000120559 1447 ntBASIC14.01□□□□□ -0.17
Hspg2Q05793 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms