Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccl21aP84444 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl21aP84444 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl21aP84444 Gm6659-201ENSMUST00000174752 547 ntBASIC15.78■□□□□ 0.12
Ccl21aP84444 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.78■□□□□ 0.12
Ccl21aP84444 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl21aP84444 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl21aP84444 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Ccl21aP84444 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccl21aP84444 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Ccl21aP84444 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccl21aP84444 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.77■□□□□ 0.12
Ccl21aP84444 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ccl21aP84444 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccl21aP84444 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccl21aP84444 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ccl21aP84444 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ccl21aP84444 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC15.76■□□□□ 0.11
Ccl21aP84444 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Gm11927-201ENSMUST00000118472 759 ntBASIC15.76■□□□□ 0.11
Ccl21aP84444 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Ccl21aP84444 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.76■□□□□ 0.11
Ccl21aP84444 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.76■□□□□ 0.11
Ccl21aP84444 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Flg-201ENSMUST00000050758 1488 ntBASIC15.76■□□□□ 0.11
Ccl21aP84444 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ccl21aP84444 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ccl21aP84444 AC107452.1-201ENSMUST00000227963 481 ntBASIC15.75■□□□□ 0.11
Ccl21aP84444 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ccl21aP84444 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.74■□□□□ 0.11
Ccl21aP84444 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ccl21aP84444 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ccl21aP84444 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ccl21aP84444 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Gm21814-202ENSMUST00000203277 873 ntBASIC15.74■□□□□ 0.11
Ccl21aP84444 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC15.74■□□□□ 0.11
Ccl21aP84444 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Ccl21aP84444 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ccl21aP84444 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccl21aP84444 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccl21aP84444 Gm13559-201ENSMUST00000120476 863 ntBASIC15.73■□□□□ 0.11
Ccl21aP84444 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccl21aP84444 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.73■□□□□ 0.11
Ccl21aP84444 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.73■□□□□ 0.11
Ccl21aP84444 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.73■□□□□ 0.11
Ccl21aP84444 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ccl21aP84444 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ccl21aP84444 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms