Protein–RNA interactions for Protein: P70298

Cux2, Homeobox protein cut-like 2, mousemouse

Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux2P70298 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Cux2P70298 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cux2P70298 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cux2P70298 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cux2P70298 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Cux2P70298 AC160393.1-201ENSMUST00000218378 1279 ntBASIC31.31■■■□□ 2.6
Cux2P70298 AC156016.1-201ENSMUST00000227190 1035 ntBASIC31.31■■■□□ 2.6
Cux2P70298 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cux2P70298 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
Cux2P70298 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cux2P70298 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC31.3■■■□□ 2.6
Cux2P70298 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cux2P70298 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
Cux2P70298 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cux2P70298 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC31.29■■■□□ 2.6
Cux2P70298 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Cux2P70298 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
Cux2P70298 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC31.29■■■□□ 2.6
Cux2P70298 AC107452.1-201ENSMUST00000227963 481 ntBASIC31.29■■■□□ 2.6
Cux2P70298 Mtag2-201ENSMUST00000058665 714 ntBASIC31.29■■■□□ 2.6
Cux2P70298 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cux2P70298 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cux2P70298 Gm20100-201ENSMUST00000209418 2272 ntBASIC31.28■■■□□ 2.6
Cux2P70298 Gm23634-201ENSMUST00000175071 91 ntBASIC31.28■■■□□ 2.6
Cux2P70298 Gm6345-202ENSMUST00000180900 204 ntBASIC31.28■■■□□ 2.6
Cux2P70298 Otx2os1-204ENSMUST00000227221 751 ntBASIC31.28■■■□□ 2.6
Cux2P70298 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cux2P70298 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
Cux2P70298 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cux2P70298 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.6
Cux2P70298 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
Cux2P70298 Gm18025-201ENSMUST00000221733 862 ntBASIC31.26■■■□□ 2.6
Cux2P70298 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC31.26■■■□□ 2.6
Cux2P70298 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC31.26■■■□□ 2.59
Cux2P70298 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC31.26■■■□□ 2.59
Cux2P70298 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cux2P70298 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC31.25■■■□□ 2.59
Cux2P70298 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cux2P70298 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
Cux2P70298 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC31.25■■■□□ 2.59
Cux2P70298 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Cux2P70298 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC31.25■■■□□ 2.59
Cux2P70298 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC31.24■■■□□ 2.59
Cux2P70298 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Gm33142-201ENSMUST00000193913 867 ntBASIC31.24■■■□□ 2.59
Cux2P70298 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Cux2P70298 Timm23-208ENSMUST00000226683 750 ntBASIC31.24■■■□□ 2.59
Cux2P70298 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC31.24■■■□□ 2.59
Cux2P70298 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
Cux2P70298 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Cux2P70298 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC31.22■■■□□ 2.59
Cux2P70298 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC31.22■■■□□ 2.59
Cux2P70298 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC31.21■■■□□ 2.59
Cux2P70298 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC31.21■■■□□ 2.59
Cux2P70298 Gm18032-201ENSMUST00000222541 538 ntBASIC31.21■■■□□ 2.59
Cux2P70298 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Cux2P70298 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
Cux2P70298 AC124581.1-201ENSMUST00000225416 1399 ntBASIC31.2■■■□□ 2.59
Cux2P70298 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC31.2■■■□□ 2.59
Cux2P70298 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC31.19■■■□□ 2.58
Cux2P70298 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cux2P70298 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Cux2P70298 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Cux2P70298 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Cux2P70298 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cux2P70298 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cux2P70298 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cux2P70298 Gm7712-202ENSMUST00000222331 1510 ntBASIC31.18■■■□□ 2.58
Cux2P70298 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Cux2P70298 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC31.17■■■□□ 2.58
Cux2P70298 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cux2P70298 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Cux2P70298 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Cux2P70298 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Cux2P70298 Gm37292-201ENSMUST00000192062 758 ntBASIC31.16■■■□□ 2.58
Cux2P70298 Gm42545-201ENSMUST00000202755 922 ntBASIC31.16■■■□□ 2.58
Cux2P70298 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC31.16■■■□□ 2.58
Cux2P70298 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cux2P70298 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Cux2P70298 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms