Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
ThraP63058 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.96■□□□□ 0.63
ThraP63058 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
ThraP63058 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.96■□□□□ 0.63
ThraP63058 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
ThraP63058 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC18.96■□□□□ 0.63
ThraP63058 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.96■□□□□ 0.63
ThraP63058 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.95■□□□□ 0.62
ThraP63058 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
ThraP63058 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Gm13234-201ENSMUST00000120010 747 ntBASIC18.95■□□□□ 0.62
ThraP63058 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.95■□□□□ 0.62
ThraP63058 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.95■□□□□ 0.62
ThraP63058 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
ThraP63058 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.95■□□□□ 0.62
ThraP63058 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
ThraP63058 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 Reep4-203ENSMUST00000226563 1444 ntBASIC18.94■□□□□ 0.62
ThraP63058 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
ThraP63058 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
ThraP63058 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
ThraP63058 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.94■□□□□ 0.62
ThraP63058 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.93■□□□□ 0.62
ThraP63058 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.93■□□□□ 0.62
ThraP63058 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.93■□□□□ 0.62
ThraP63058 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.93■□□□□ 0.62
ThraP63058 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.93■□□□□ 0.62
ThraP63058 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC18.93■□□□□ 0.62
ThraP63058 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
ThraP63058 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ThraP63058 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ThraP63058 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ThraP63058 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC18.92■□□□□ 0.62
ThraP63058 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC18.92■□□□□ 0.62
ThraP63058 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.92■□□□□ 0.62
ThraP63058 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ThraP63058 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ThraP63058 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ThraP63058 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
ThraP63058 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.91■□□□□ 0.62
ThraP63058 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.91■□□□□ 0.62
ThraP63058 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ThraP63058 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ThraP63058 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.9■□□□□ 0.62
ThraP63058 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
ThraP63058 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.9■□□□□ 0.62
ThraP63058 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.9■□□□□ 0.62
ThraP63058 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
ThraP63058 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
ThraP63058 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
ThraP63058 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms