Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SmoP56726 Gm6211-202ENSMUST00000167849 925 ntBASIC18.97■□□□□ 0.63
SmoP56726 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC18.97■□□□□ 0.63
SmoP56726 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.97■□□□□ 0.63
SmoP56726 CT025689.6-201ENSMUST00000224991 1104 ntBASIC18.97■□□□□ 0.63
SmoP56726 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
SmoP56726 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SmoP56726 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SmoP56726 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.96■□□□□ 0.63
SmoP56726 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.96■□□□□ 0.63
SmoP56726 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SmoP56726 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.96■□□□□ 0.63
SmoP56726 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SmoP56726 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
SmoP56726 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.95■□□□□ 0.62
SmoP56726 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.95■□□□□ 0.62
SmoP56726 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.95■□□□□ 0.62
SmoP56726 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SmoP56726 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.94■□□□□ 0.62
SmoP56726 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC18.94■□□□□ 0.62
SmoP56726 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC18.94■□□□□ 0.62
SmoP56726 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
SmoP56726 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.94■□□□□ 0.62
SmoP56726 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.94■□□□□ 0.62
SmoP56726 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SmoP56726 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SmoP56726 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SmoP56726 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SmoP56726 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SmoP56726 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SmoP56726 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.93■□□□□ 0.62
SmoP56726 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SmoP56726 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.92■□□□□ 0.62
SmoP56726 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SmoP56726 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.92■□□□□ 0.62
SmoP56726 Gm5297-201ENSMUST00000198555 1171 ntBASIC18.92■□□□□ 0.62
SmoP56726 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SmoP56726 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.91■□□□□ 0.62
SmoP56726 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SmoP56726 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SmoP56726 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SmoP56726 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SmoP56726 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.9■□□□□ 0.62
SmoP56726 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SmoP56726 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SmoP56726 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms