Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks2P56390 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC15.71■□□□□ 0.11
Cks2P56390 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks2P56390 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.71■□□□□ 0.11
Cks2P56390 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks2P56390 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cks2P56390 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cks2P56390 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Cks2P56390 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Cks2P56390 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Cks2P56390 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cks2P56390 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Golgb1-201ENSMUST00000023534 498 ntBASIC15.7■□□□□ 0.1
Cks2P56390 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Cks2P56390 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.7■□□□□ 0.1
Cks2P56390 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Cks2P56390 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cks2P56390 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Cks2P56390 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.69■□□□□ 0.1
Cks2P56390 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cks2P56390 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Cks2P56390 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC15.69■□□□□ 0.1
Cks2P56390 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cks2P56390 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cks2P56390 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks2P56390 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks2P56390 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks2P56390 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC15.68■□□□□ 0.1
Cks2P56390 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cks2P56390 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.68■□□□□ 0.1
Cks2P56390 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cks2P56390 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cks2P56390 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.68■□□□□ 0.1
Cks2P56390 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cks2P56390 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Cks2P56390 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cks2P56390 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Gm9207-201ENSMUST00000198773 1115 ntBASIC15.67■□□□□ 0.1
Cks2P56390 Gm45102-201ENSMUST00000207427 857 ntBASIC15.67■□□□□ 0.1
Cks2P56390 Rps24-207ENSMUST00000224568 714 ntBASIC15.67■□□□□ 0.1
Cks2P56390 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.67■□□□□ 0.1
Cks2P56390 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cks2P56390 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Cks2P56390 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Gm14117-201ENSMUST00000122417 843 ntBASIC15.66■□□□□ 0.1
Cks2P56390 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cks2P56390 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cks2P56390 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cks2P56390 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
Cks2P56390 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cks2P56390 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cks2P56390 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms