Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm10698-201ENSMUST00000182663 604 ntBASIC21.05■□□□□ 0.96
Hmgcs2P54869 Gm18666-201ENSMUST00000190039 958 ntBASIC21.05■□□□□ 0.96
Hmgcs2P54869 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.05■□□□□ 0.96
Hmgcs2P54869 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hmgcs2P54869 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC21.04■□□□□ 0.96
Hmgcs2P54869 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.04■□□□□ 0.96
Hmgcs2P54869 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hmgcs2P54869 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Hmgcs2P54869 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 AL672049.1-201ENSMUST00000197943 91 ntBASIC21.02■□□□□ 0.96
Hmgcs2P54869 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 AC154649.1-201ENSMUST00000227392 384 ntBASIC21.02■□□□□ 0.96
Hmgcs2P54869 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hmgcs2P54869 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Hmgcs2P54869 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.01■□□□□ 0.95
Hmgcs2P54869 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs2P54869 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs2P54869 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs2P54869 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs2P54869 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC21.01■□□□□ 0.95
Hmgcs2P54869 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hmgcs2P54869 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Hmgcs2P54869 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21■□□□□ 0.95
Hmgcs2P54869 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Gm715-201ENSMUST00000117865 831 ntBASIC21■□□□□ 0.95
Hmgcs2P54869 Gm15847-201ENSMUST00000121417 1065 ntBASIC21■□□□□ 0.95
Hmgcs2P54869 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC21■□□□□ 0.95
Hmgcs2P54869 AC160393.1-201ENSMUST00000218378 1279 ntBASIC21■□□□□ 0.95
Hmgcs2P54869 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
Hmgcs2P54869 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21■□□□□ 0.95
Hmgcs2P54869 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Hmgcs2P54869 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hmgcs2P54869 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.99■□□□□ 0.95
Hmgcs2P54869 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 AC135963.1-201ENSMUST00000211640 717 ntBASIC20.99■□□□□ 0.95
Hmgcs2P54869 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.99■□□□□ 0.95
Hmgcs2P54869 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hmgcs2P54869 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Hmgcs2P54869 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.98■□□□□ 0.95
Hmgcs2P54869 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Hmgcs2P54869 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms