Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ephb3P54754 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ephb3P54754 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ephb3P54754 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.79■□□□□ 0.76
Ephb3P54754 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ephb3P54754 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.79■□□□□ 0.76
Ephb3P54754 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ephb3P54754 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.79■□□□□ 0.76
Ephb3P54754 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.79■□□□□ 0.76
Ephb3P54754 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ephb3P54754 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Ephb3P54754 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ephb3P54754 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC19.78■□□□□ 0.76
Ephb3P54754 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.78■□□□□ 0.76
Ephb3P54754 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ephb3P54754 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.78■□□□□ 0.76
Ephb3P54754 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Ephb3P54754 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.77■□□□□ 0.76
Ephb3P54754 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.77■□□□□ 0.76
Ephb3P54754 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.77■□□□□ 0.76
Ephb3P54754 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ephb3P54754 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.77■□□□□ 0.76
Ephb3P54754 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ephb3P54754 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.76■□□□□ 0.75
Ephb3P54754 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ephb3P54754 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ephb3P54754 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.76■□□□□ 0.75
Ephb3P54754 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC19.76■□□□□ 0.75
Ephb3P54754 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ephb3P54754 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ephb3P54754 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.76■□□□□ 0.75
Ephb3P54754 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.75■□□□□ 0.75
Ephb3P54754 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.75■□□□□ 0.75
Ephb3P54754 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC19.75■□□□□ 0.75
Ephb3P54754 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.75■□□□□ 0.75
Ephb3P54754 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ephb3P54754 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.75■□□□□ 0.75
Ephb3P54754 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Ephb3P54754 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC19.75■□□□□ 0.75
Ephb3P54754 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.75■□□□□ 0.75
Ephb3P54754 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ephb3P54754 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ephb3P54754 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ephb3P54754 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.73■□□□□ 0.75
Ephb3P54754 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ephb3P54754 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Gm13158-201ENSMUST00000122007 736 ntBASIC19.72■□□□□ 0.75
Ephb3P54754 Mir5122-201ENSMUST00000175004 89 ntBASIC19.72■□□□□ 0.75
Ephb3P54754 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Ephb3P54754 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Ephb3P54754 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms