Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Lhx3P50481 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lhx3P50481 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Lhx3P50481 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lhx3P50481 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Lhx3P50481 Gm29257-201ENSMUST00000186115 639 ntBASIC19.14■□□□□ 0.65
Lhx3P50481 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lhx3P50481 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Lhx3P50481 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx3P50481 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx3P50481 Gm7290-201ENSMUST00000104990 617 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Gm13148-201ENSMUST00000118892 745 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Gm12918-201ENSMUST00000120234 636 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Gm15710-201ENSMUST00000121821 636 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Lhx3P50481 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx3P50481 Gm5075-201ENSMUST00000196916 622 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx3P50481 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.13■□□□□ 0.65
Lhx3P50481 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lhx3P50481 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Lhx3P50481 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Lhx3P50481 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Lhx3P50481 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.12■□□□□ 0.65
Lhx3P50481 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Lhx3P50481 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Lhx3P50481 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Lhx3P50481 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.11■□□□□ 0.65
Lhx3P50481 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Lhx3P50481 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Lhx3P50481 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.1■□□□□ 0.65
Lhx3P50481 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
Lhx3P50481 Gm6211-202ENSMUST00000167849 925 ntBASIC19.1■□□□□ 0.65
Lhx3P50481 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.1■□□□□ 0.65
Lhx3P50481 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Lhx3P50481 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Lhx3P50481 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Gm10602-201ENSMUST00000098239 609 ntBASIC19.09■□□□□ 0.65
Lhx3P50481 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.09■□□□□ 0.65
Lhx3P50481 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Lhx3P50481 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx3P50481 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx3P50481 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Lhx3P50481 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
Lhx3P50481 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
Lhx3P50481 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.08■□□□□ 0.64
Lhx3P50481 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Lhx3P50481 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
Lhx3P50481 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Lhx3P50481 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms