Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Shmt1P50431 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Gm12933-201ENSMUST00000120203 872 ntBASIC19.93■□□□□ 0.78
Shmt1P50431 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Shmt1P50431 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shmt1P50431 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Shmt1P50431 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Shmt1P50431 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.92■□□□□ 0.78
Shmt1P50431 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Shmt1P50431 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.92■□□□□ 0.78
Shmt1P50431 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Shmt1P50431 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt1P50431 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt1P50431 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt1P50431 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt1P50431 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Shmt1P50431 Gm13148-201ENSMUST00000118892 745 ntBASIC19.91■□□□□ 0.78
Shmt1P50431 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.91■□□□□ 0.78
Shmt1P50431 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.91■□□□□ 0.78
Shmt1P50431 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Shmt1P50431 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Shmt1P50431 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Shmt1P50431 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shmt1P50431 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.9■□□□□ 0.78
Shmt1P50431 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Shmt1P50431 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Gm10167-201ENSMUST00000150411 1479 ntBASIC19.9■□□□□ 0.78
Shmt1P50431 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Shmt1P50431 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Shmt1P50431 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Shmt1P50431 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Shmt1P50431 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
Shmt1P50431 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.89■□□□□ 0.77
Shmt1P50431 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Shmt1P50431 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Shmt1P50431 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
Shmt1P50431 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Shmt1P50431 Mir5133-201ENSMUST00000174955 77 ntBASIC19.88■□□□□ 0.77
Shmt1P50431 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Shmt1P50431 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Shmt1P50431 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Shmt1P50431 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.87■□□□□ 0.77
Shmt1P50431 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Shmt1P50431 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Shmt1P50431 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.86■□□□□ 0.77
Shmt1P50431 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt1P50431 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt1P50431 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt1P50431 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt1P50431 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Shmt1P50431 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC19.86■□□□□ 0.77
Shmt1P50431 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Shmt1P50431 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms