Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
Hist1h1dP43277 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Hist1h1dP43277 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.9■□□□□ 0.14
Hist1h1dP43277 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Hist1h1dP43277 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Gm5576-201ENSMUST00000075809 1236 ntBASIC15.89■□□□□ 0.13
Hist1h1dP43277 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Hist1h1dP43277 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC15.88■□□□□ 0.13
Hist1h1dP43277 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Hist1h1dP43277 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Hist1h1dP43277 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.87■□□□□ 0.13
Hist1h1dP43277 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Rarb-207ENSMUST00000225921 2756 ntBASIC15.87■□□□□ 0.13
Hist1h1dP43277 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Hist1h1dP43277 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.87■□□□□ 0.13
Hist1h1dP43277 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1dP43277 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1dP43277 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1dP43277 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Hist1h1dP43277 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms