Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HttP42859 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC20.44■□□□□ 0.86
HttP42859 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.44■□□□□ 0.86
HttP42859 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.44■□□□□ 0.86
HttP42859 Odf3b-204ENSMUST00000227834 930 ntBASIC20.44■□□□□ 0.86
HttP42859 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
HttP42859 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.44■□□□□ 0.86
HttP42859 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
HttP42859 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.43■□□□□ 0.86
HttP42859 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
HttP42859 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.43■□□□□ 0.86
HttP42859 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HttP42859 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
HttP42859 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.42■□□□□ 0.86
HttP42859 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HttP42859 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.42■□□□□ 0.86
HttP42859 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HttP42859 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HttP42859 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC20.41■□□□□ 0.86
HttP42859 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.41■□□□□ 0.86
HttP42859 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC20.41■□□□□ 0.86
HttP42859 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HttP42859 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
HttP42859 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.4■□□□□ 0.86
HttP42859 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HttP42859 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HttP42859 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HttP42859 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HttP42859 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HttP42859 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
HttP42859 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HttP42859 AC133598.3-202ENSMUST00000224219 531 ntBASIC20.39■□□□□ 0.85
HttP42859 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
HttP42859 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.39■□□□□ 0.85
HttP42859 Gm7284-201ENSMUST00000131667 944 ntBASIC20.39■□□□□ 0.85
HttP42859 Gm18032-201ENSMUST00000222541 538 ntBASIC20.39■□□□□ 0.85
HttP42859 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
HttP42859 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
HttP42859 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.38■□□□□ 0.85
HttP42859 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HttP42859 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
HttP42859 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.37■□□□□ 0.85
HttP42859 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.37■□□□□ 0.85
HttP42859 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HttP42859 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
HttP42859 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HttP42859 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC20.36■□□□□ 0.85
HttP42859 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms