Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LdlrP35951 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
LdlrP35951 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.68■□□□□ 0.58
LdlrP35951 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LdlrP35951 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
LdlrP35951 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LdlrP35951 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.67■□□□□ 0.58
LdlrP35951 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LdlrP35951 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LdlrP35951 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
LdlrP35951 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LdlrP35951 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
LdlrP35951 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LdlrP35951 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LdlrP35951 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LdlrP35951 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LdlrP35951 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.66■□□□□ 0.58
LdlrP35951 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 Gm10493-201ENSMUST00000097270 612 ntBASIC18.66■□□□□ 0.58
LdlrP35951 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
LdlrP35951 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
LdlrP35951 Rarb-207ENSMUST00000225921 2756 ntBASIC18.66■□□□□ 0.58
LdlrP35951 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.66■□□□□ 0.58
LdlrP35951 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LdlrP35951 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.65■□□□□ 0.58
LdlrP35951 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.65■□□□□ 0.58
LdlrP35951 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Gm27405-201ENSMUST00000184201 112 ntBASIC18.65■□□□□ 0.58
LdlrP35951 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.65■□□□□ 0.58
LdlrP35951 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LdlrP35951 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.64■□□□□ 0.57
LdlrP35951 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LdlrP35951 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LdlrP35951 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LdlrP35951 Gm10849-201ENSMUST00000100397 618 ntBASIC18.63■□□□□ 0.57
LdlrP35951 Gm26571-201ENSMUST00000181399 666 ntBASIC18.63■□□□□ 0.57
LdlrP35951 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LdlrP35951 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LdlrP35951 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LdlrP35951 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LdlrP35951 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LdlrP35951 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LdlrP35951 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LdlrP35951 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LdlrP35951 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
LdlrP35951 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
LdlrP35951 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.62■□□□□ 0.57
LdlrP35951 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LdlrP35951 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.62■□□□□ 0.57
LdlrP35951 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LdlrP35951 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms