Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC20.25■□□□□ 0.83
Mmp3P28862 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
Mmp3P28862 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp3P28862 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mmp3P28862 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC20.24■□□□□ 0.83
Mmp3P28862 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp3P28862 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp3P28862 Gm13168-201ENSMUST00000121771 632 ntBASIC20.24■□□□□ 0.83
Mmp3P28862 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Mmp3P28862 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Mmp3P28862 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp3P28862 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Mmp3P28862 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Mmp3P28862 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.23■□□□□ 0.83
Mmp3P28862 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.23■□□□□ 0.83
Mmp3P28862 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.23■□□□□ 0.83
Mmp3P28862 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Mmp3P28862 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.23■□□□□ 0.83
Mmp3P28862 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp3P28862 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Mmp3P28862 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.22■□□□□ 0.83
Mmp3P28862 Gm27275-201ENSMUST00000184318 272 ntBASIC20.22■□□□□ 0.83
Mmp3P28862 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mmp3P28862 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp3P28862 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.21■□□□□ 0.83
Mmp3P28862 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp3P28862 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC20.21■□□□□ 0.83
Mmp3P28862 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp3P28862 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp3P28862 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Gm12896-201ENSMUST00000118430 226 ntBASIC20.2■□□□□ 0.82
Mmp3P28862 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC20.2■□□□□ 0.82
Mmp3P28862 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC20.2■□□□□ 0.82
Mmp3P28862 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mmp3P28862 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp3P28862 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp3P28862 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp3P28862 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp3P28862 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Mmp3P28862 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp3P28862 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC20.19■□□□□ 0.82
Mmp3P28862 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Mmp3P28862 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp3P28862 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp3P28862 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp3P28862 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Mmp3P28862 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp3P28862 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp3P28862 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp3P28862 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.18■□□□□ 0.82
Mmp3P28862 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms