Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RxrbP28704 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RxrbP28704 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RxrbP28704 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.92■□□□□ 0.62
RxrbP28704 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
RxrbP28704 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RxrbP28704 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RxrbP28704 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
RxrbP28704 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RxrbP28704 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.91■□□□□ 0.62
RxrbP28704 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.91■□□□□ 0.62
RxrbP28704 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
RxrbP28704 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RxrbP28704 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
RxrbP28704 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
RxrbP28704 Gm12922-201ENSMUST00000120626 809 ntBASIC18.9■□□□□ 0.62
RxrbP28704 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Serp2-204ENSMUST00000228055 705 ntBASIC18.9■□□□□ 0.62
RxrbP28704 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.9■□□□□ 0.62
RxrbP28704 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RxrbP28704 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RxrbP28704 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.89■□□□□ 0.61
RxrbP28704 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
RxrbP28704 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RxrbP28704 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RxrbP28704 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
RxrbP28704 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
RxrbP28704 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.88■□□□□ 0.61
RxrbP28704 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Gm45906-201ENSMUST00000208911 1430 ntBASIC18.88■□□□□ 0.61
RxrbP28704 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 Gm42911-201ENSMUST00000199360 1630 ntBASIC18.88■□□□□ 0.61
RxrbP28704 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
RxrbP28704 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.88■□□□□ 0.61
RxrbP28704 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC18.88■□□□□ 0.61
RxrbP28704 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
RxrbP28704 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RxrbP28704 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RxrbP28704 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RxrbP28704 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RxrbP28704 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RxrbP28704 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC18.86■□□□□ 0.61
RxrbP28704 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
RxrbP28704 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.86■□□□□ 0.61
RxrbP28704 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RxrbP28704 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.85■□□□□ 0.61
RxrbP28704 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RxrbP28704 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
RxrbP28704 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RxrbP28704 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RxrbP28704 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms