Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gja4P28235 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gja4P28235 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Gja4P28235 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC18.88■□□□□ 0.61
Gja4P28235 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.87■□□□□ 0.61
Gja4P28235 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.87■□□□□ 0.61
Gja4P28235 Gm21596-201ENSMUST00000178049 1316 ntBASIC18.87■□□□□ 0.61
Gja4P28235 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.87■□□□□ 0.61
Gja4P28235 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Gja4P28235 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Gja4P28235 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.86■□□□□ 0.61
Gja4P28235 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Gja4P28235 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.86■□□□□ 0.61
Gja4P28235 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Gja4P28235 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC18.86■□□□□ 0.61
Gja4P28235 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Gja4P28235 Gm5540-201ENSMUST00000131852 1848 ntBASIC18.86■□□□□ 0.61
Gja4P28235 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
Gja4P28235 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Gja4P28235 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.85■□□□□ 0.61
Gja4P28235 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Gja4P28235 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Gja4P28235 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Gja4P28235 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
Gja4P28235 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Gm2399-201ENSMUST00000104944 225 ntBASIC18.84■□□□□ 0.61
Gja4P28235 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Gja4P28235 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.84■□□□□ 0.61
Gja4P28235 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC18.84■□□□□ 0.61
Gja4P28235 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.84■□□□□ 0.61
Gja4P28235 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Gja4P28235 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gja4P28235 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC18.83■□□□□ 0.61
Gja4P28235 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
Gja4P28235 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Gja4P28235 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Gja4P28235 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Gm6576-201ENSMUST00000169678 883 ntBASIC18.83■□□□□ 0.6
Gja4P28235 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC18.83■□□□□ 0.6
Gja4P28235 Gm18666-201ENSMUST00000190039 958 ntBASIC18.83■□□□□ 0.6
Gja4P28235 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC18.83■□□□□ 0.6
Gja4P28235 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC18.83■□□□□ 0.6
Gja4P28235 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.83■□□□□ 0.6
Gja4P28235 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.83■□□□□ 0.6
Gja4P28235 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Gja4P28235 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Gja4P28235 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Gja4P28235 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Gja4P28235 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gja4P28235 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.82■□□□□ 0.6
Gja4P28235 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Gja4P28235 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC18.82■□□□□ 0.6
Gja4P28235 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.82■□□□□ 0.6
Gja4P28235 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC18.82■□□□□ 0.6
Gja4P28235 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Gja4P28235 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms