Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
Tnfrsf9P20334 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Tnfrsf9P20334 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf9P20334 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf9P20334 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.21■□□□□ 0.02
Tnfrsf9P20334 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf9P20334 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf9P20334 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Tnfrsf9P20334 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC15.2■□□□□ 0.02
Tnfrsf9P20334 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Tnfrsf9P20334 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Mir6236-201ENSMUST00000184437 123 ntBASIC15.19■□□□□ 0.02
Tnfrsf9P20334 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Tnfrsf9P20334 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Gm13148-201ENSMUST00000118892 745 ntBASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Tnfrsf9P20334 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Tnfrsf9P20334 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.16■□□□□ 0.02
Tnfrsf9P20334 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms