Protein–RNA interactions for Protein: P15379

Cd44, CD44 antigen, mousemouse

Predictions only

Length 778 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd44P15379 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cd44P15379 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.8■□□□□ 0.76
Cd44P15379 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.8■□□□□ 0.76
Cd44P15379 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cd44P15379 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cd44P15379 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.79■□□□□ 0.76
Cd44P15379 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.79■□□□□ 0.76
Cd44P15379 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.79■□□□□ 0.76
Cd44P15379 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
Cd44P15379 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.79■□□□□ 0.76
Cd44P15379 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cd44P15379 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cd44P15379 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cd44P15379 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.78■□□□□ 0.76
Cd44P15379 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cd44P15379 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Gm7860-201ENSMUST00000121190 879 ntBASIC19.77■□□□□ 0.76
Cd44P15379 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cd44P15379 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.77■□□□□ 0.75
Cd44P15379 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd44P15379 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
Cd44P15379 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd44P15379 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cd44P15379 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Cd44P15379 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cd44P15379 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.76■□□□□ 0.75
Cd44P15379 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cd44P15379 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cd44P15379 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.75■□□□□ 0.75
Cd44P15379 Smad6-203ENSMUST00000179458 273 ntBASIC19.75■□□□□ 0.75
Cd44P15379 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cd44P15379 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.75■□□□□ 0.75
Cd44P15379 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cd44P15379 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cd44P15379 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cd44P15379 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
Cd44P15379 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Cd44P15379 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Cd44P15379 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Cd44P15379 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.73■□□□□ 0.75
Cd44P15379 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.73■□□□□ 0.75
Cd44P15379 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cd44P15379 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms