Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC20.26■□□□□ 0.83
Hoxc8P09025 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hoxc8P09025 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.26■□□□□ 0.83
Hoxc8P09025 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc8P09025 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.25■□□□□ 0.83
Hoxc8P09025 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.25■□□□□ 0.83
Hoxc8P09025 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.25■□□□□ 0.83
Hoxc8P09025 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hoxc8P09025 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Hoxc8P09025 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC20.24■□□□□ 0.83
Hoxc8P09025 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC20.24■□□□□ 0.83
Hoxc8P09025 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.24■□□□□ 0.83
Hoxc8P09025 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hoxc8P09025 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.23■□□□□ 0.83
Hoxc8P09025 Gm715-201ENSMUST00000117865 831 ntBASIC20.23■□□□□ 0.83
Hoxc8P09025 Gm13158-201ENSMUST00000122007 736 ntBASIC20.23■□□□□ 0.83
Hoxc8P09025 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 H2-K2-201ENSMUST00000174250 1049 ntBASIC20.23■□□□□ 0.83
Hoxc8P09025 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.23■□□□□ 0.83
Hoxc8P09025 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hoxc8P09025 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hoxc8P09025 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxc8P09025 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.21■□□□□ 0.83
Hoxc8P09025 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.21■□□□□ 0.83
Hoxc8P09025 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Gm15378-201ENSMUST00000121894 207 ntBASIC20.21■□□□□ 0.83
Hoxc8P09025 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC20.21■□□□□ 0.83
Hoxc8P09025 AC124603.1-201ENSMUST00000223843 308 ntBASIC20.21■□□□□ 0.83
Hoxc8P09025 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.21■□□□□ 0.83
Hoxc8P09025 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hoxc8P09025 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hoxc8P09025 AC126028.2-201ENSMUST00000228100 1833 ntBASIC20.2■□□□□ 0.82
Hoxc8P09025 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Hoxc8P09025 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Hoxc8P09025 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc8P09025 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.2■□□□□ 0.82
Hoxc8P09025 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc8P09025 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc8P09025 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc8P09025 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hoxc8P09025 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc8P09025 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.19■□□□□ 0.82
Hoxc8P09025 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc8P09025 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc8P09025 Mir1199-201ENSMUST00000117015 119 ntBASIC20.19■□□□□ 0.82
Hoxc8P09025 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Hoxc8P09025 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.19■□□□□ 0.82
Hoxc8P09025 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Hoxc8P09025 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.18■□□□□ 0.82
Hoxc8P09025 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
Hoxc8P09025 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Gm11927-201ENSMUST00000118472 759 ntBASIC20.18■□□□□ 0.82
Hoxc8P09025 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.18■□□□□ 0.82
Hoxc8P09025 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.18■□□□□ 0.82
Hoxc8P09025 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Hoxc8P09025 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms