Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Gm21814-202ENSMUST00000203277 873 ntBASIC21.78■■□□□ 1.08
Polr2aP08775 Gm30025-201ENSMUST00000218555 728 ntBASIC21.78■■□□□ 1.08
Polr2aP08775 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Polr2aP08775 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Polr2aP08775 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC21.77■■□□□ 1.08
Polr2aP08775 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr2aP08775 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Polr2aP08775 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.77■■□□□ 1.08
Polr2aP08775 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Polr2aP08775 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC21.76■■□□□ 1.07
Polr2aP08775 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Polr2aP08775 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Polr2aP08775 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Polr2aP08775 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Polr2aP08775 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.75■■□□□ 1.07
Polr2aP08775 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC21.75■■□□□ 1.07
Polr2aP08775 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.74■■□□□ 1.07
Polr2aP08775 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Polr2aP08775 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Polr2aP08775 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Polr2aP08775 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Polr2aP08775 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC21.74■■□□□ 1.07
Polr2aP08775 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Mtag2-201ENSMUST00000058665 714 ntBASIC21.74■■□□□ 1.07
Polr2aP08775 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC21.74■■□□□ 1.07
Polr2aP08775 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Polr2aP08775 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Polr2aP08775 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Polr2aP08775 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Polr2aP08775 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC21.73■■□□□ 1.07
Polr2aP08775 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC21.73■■□□□ 1.07
Polr2aP08775 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Polr2aP08775 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC21.73■■□□□ 1.07
Polr2aP08775 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Polr2aP08775 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC21.72■■□□□ 1.07
Polr2aP08775 Gm7889-201ENSMUST00000185591 958 ntBASIC21.72■■□□□ 1.07
Polr2aP08775 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC21.72■■□□□ 1.07
Polr2aP08775 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Polr2aP08775 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.72■■□□□ 1.07
Polr2aP08775 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Polr2aP08775 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Polr2aP08775 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Polr2aP08775 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC21.72■■□□□ 1.07
Polr2aP08775 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC21.71■■□□□ 1.07
Polr2aP08775 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC21.71■■□□□ 1.07
Polr2aP08775 Gm18025-201ENSMUST00000221733 862 ntBASIC21.71■■□□□ 1.07
Polr2aP08775 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Polr2aP08775 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Polr2aP08775 Gm21362-201ENSMUST00000194272 928 ntBASIC21.7■■□□□ 1.07
Polr2aP08775 Gm10459-201ENSMUST00000202708 1155 ntBASIC21.7■■□□□ 1.07
Polr2aP08775 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Polr2aP08775 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2aP08775 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Polr2aP08775 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Polr2aP08775 Zfp783-201ENSMUST00000095946 670 ntBASIC21.7■■□□□ 1.06
Polr2aP08775 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Polr2aP08775 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2aP08775 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2aP08775 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC21.69■■□□□ 1.06
Polr2aP08775 Gm11539-201ENSMUST00000119837 557 ntBASIC21.69■■□□□ 1.06
Polr2aP08775 Gm13436-201ENSMUST00000120418 567 ntBASIC21.69■■□□□ 1.06
Polr2aP08775 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC21.69■■□□□ 1.06
Polr2aP08775 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Polr2aP08775 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2aP08775 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Polr2aP08775 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms