Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Sod1P08228 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sod1P08228 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.83■□□□□ 0.44
Sod1P08228 AC158538.1-201ENSMUST00000225870 294 ntBASIC17.83■□□□□ 0.44
Sod1P08228 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.83■□□□□ 0.44
Sod1P08228 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Sod1P08228 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Sod1P08228 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Sod1P08228 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.82■□□□□ 0.44
Sod1P08228 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Sod1P08228 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Sod1P08228 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.82■□□□□ 0.44
Sod1P08228 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Sod1P08228 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Sod1P08228 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Sod1P08228 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Sod1P08228 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.81■□□□□ 0.44
Sod1P08228 Gm715-201ENSMUST00000117865 831 ntBASIC17.81■□□□□ 0.44
Sod1P08228 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.81■□□□□ 0.44
Sod1P08228 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sod1P08228 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Sod1P08228 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sod1P08228 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Sod1P08228 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Sod1P08228 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Sod1P08228 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.8■□□□□ 0.44
Sod1P08228 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Sod1P08228 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Sod1P08228 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 Gm13158-201ENSMUST00000122007 736 ntBASIC17.79■□□□□ 0.44
Sod1P08228 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.79■□□□□ 0.44
Sod1P08228 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Sod1P08228 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
Sod1P08228 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Sod1P08228 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sod1P08228 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.78■□□□□ 0.44
Sod1P08228 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Sod1P08228 H2-K2-201ENSMUST00000174250 1049 ntBASIC17.78■□□□□ 0.44
Sod1P08228 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.78■□□□□ 0.44
Sod1P08228 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Sod1P08228 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sod1P08228 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sod1P08228 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sod1P08228 Gm15378-201ENSMUST00000121894 207 ntBASIC17.77■□□□□ 0.44
Sod1P08228 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sod1P08228 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC17.77■□□□□ 0.44
Sod1P08228 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.77■□□□□ 0.44
Sod1P08228 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.77■□□□□ 0.44
Sod1P08228 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC17.77■□□□□ 0.44
Sod1P08228 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Sod1P08228 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sod1P08228 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sod1P08228 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Sod1P08228 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.76■□□□□ 0.43
Sod1P08228 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Sod1P08228 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Sod1P08228 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Sod1P08228 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sod1P08228 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Sod1P08228 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms