Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
P06344 Gm6420-201ENSMUST00000193885 723 ntBASIC16.75■□□□□ 0.27
P06344 Gm42555-201ENSMUST00000199304 1039 ntBASIC16.75■□□□□ 0.27
P06344 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
P06344 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.75■□□□□ 0.27
P06344 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
P06344 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
P06344 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
P06344 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.74■□□□□ 0.27
P06344 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P06344 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P06344 Nespas-201ENSMUST00000143738 1083 ntBASIC16.74■□□□□ 0.27
P06344 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 AC126028.2-201ENSMUST00000228100 1833 ntBASIC16.74■□□□□ 0.27
P06344 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P06344 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.73■□□□□ 0.27
P06344 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P06344 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.72■□□□□ 0.27
P06344 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
P06344 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
P06344 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
P06344 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
P06344 Gm10602-201ENSMUST00000098239 609 ntBASIC16.72■□□□□ 0.27
P06344 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P06344 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
P06344 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
P06344 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
P06344 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.71■□□□□ 0.27
P06344 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.71■□□□□ 0.27
P06344 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P06344 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.71■□□□□ 0.26
P06344 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
P06344 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC16.7■□□□□ 0.26
P06344 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
P06344 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.69■□□□□ 0.26
P06344 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
P06344 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
P06344 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.69■□□□□ 0.26
P06344 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.69■□□□□ 0.26
P06344 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P06344 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC16.69■□□□□ 0.26
P06344 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms