Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
P06328 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.76□□□□□ -0.21
P06328 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
P06328 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC13.76□□□□□ -0.21
P06328 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
P06328 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.75□□□□□ -0.21
P06328 Flvcr1-202ENSMUST00000191946 1216 ntBASIC13.75□□□□□ -0.21
P06328 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC13.75□□□□□ -0.21
P06328 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
P06328 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
P06328 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
P06328 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
P06328 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC13.74□□□□□ -0.21
P06328 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.74□□□□□ -0.21
P06328 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
P06328 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
P06328 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
P06328 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC13.74□□□□□ -0.21
P06328 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
P06328 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
P06328 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
P06328 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC13.73□□□□□ -0.21
P06328 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC13.73□□□□□ -0.21
P06328 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC13.73□□□□□ -0.21
P06328 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.73□□□□□ -0.21
P06328 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
P06328 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
P06328 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
P06328 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P06328 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.72□□□□□ -0.21
P06328 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
P06328 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
P06328 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC13.72□□□□□ -0.21
P06328 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
P06328 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
P06328 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
P06328 Gm11421-201ENSMUST00000122124 294 ntBASIC13.71□□□□□ -0.21
P06328 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms