Protein–RNA interactions for Protein: P04104

Krt1, Keratin, type II cytoskeletal 1, mousemouse

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt1P04104 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Krt1P04104 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Krt1P04104 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Krt1P04104 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Krt1P04104 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Krt1P04104 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.83■□□□□ 0.45
Krt1P04104 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Krt1P04104 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Krt1P04104 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Krt1P04104 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Krt1P04104 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt1P04104 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt1P04104 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Krt1P04104 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Krt1P04104 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.82■□□□□ 0.44
Krt1P04104 Gm43530-201ENSMUST00000195920 274 ntBASIC17.82■□□□□ 0.44
Krt1P04104 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Krt1P04104 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.82■□□□□ 0.44
Krt1P04104 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Krt1P04104 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krt1P04104 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.82■□□□□ 0.44
Krt1P04104 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Krt1P04104 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krt1P04104 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.8■□□□□ 0.44
Krt1P04104 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Krt1P04104 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.8■□□□□ 0.44
Krt1P04104 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Krt1P04104 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krt1P04104 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krt1P04104 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.79■□□□□ 0.44
Krt1P04104 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.79■□□□□ 0.44
Krt1P04104 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt1P04104 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.79■□□□□ 0.44
Krt1P04104 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krt1P04104 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Krt1P04104 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt1P04104 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Krt1P04104 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Krt1P04104 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krt1P04104 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Krt1P04104 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Krt1P04104 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.78■□□□□ 0.44
Krt1P04104 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krt1P04104 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
Krt1P04104 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.77■□□□□ 0.44
Krt1P04104 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Krt1P04104 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krt1P04104 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms