Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Hoxa3P02831 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Hoxa3P02831 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC15.72■□□□□ 0.11
Hoxa3P02831 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Gm7860-201ENSMUST00000121190 879 ntBASIC15.71■□□□□ 0.11
Hoxa3P02831 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC15.71■□□□□ 0.11
Hoxa3P02831 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.71■□□□□ 0.11
Hoxa3P02831 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Hoxa3P02831 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Hoxa3P02831 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Hoxa3P02831 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC15.71■□□□□ 0.1
Hoxa3P02831 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.7■□□□□ 0.1
Hoxa3P02831 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Gm6420-201ENSMUST00000193885 723 ntBASIC15.7■□□□□ 0.1
Hoxa3P02831 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Hoxa3P02831 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Hoxa3P02831 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Hoxa3P02831 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa3P02831 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
Hoxa3P02831 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa3P02831 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.69■□□□□ 0.1
Hoxa3P02831 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa3P02831 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.69■□□□□ 0.1
Hoxa3P02831 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
Hoxa3P02831 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa3P02831 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Hoxa3P02831 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Nespas-201ENSMUST00000143738 1083 ntBASIC15.68■□□□□ 0.1
Hoxa3P02831 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Hoxa3P02831 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Hoxa3P02831 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.67■□□□□ 0.1
Hoxa3P02831 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC15.67■□□□□ 0.1
Hoxa3P02831 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hoxa3P02831 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hoxa3P02831 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms