Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.17■□□□□ 0.5
Best1O88870 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.17■□□□□ 0.5
Best1O88870 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Best1O88870 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.16■□□□□ 0.5
Best1O88870 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
Best1O88870 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.16■□□□□ 0.5
Best1O88870 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Best1O88870 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Best1O88870 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.15■□□□□ 0.5
Best1O88870 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Best1O88870 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.15■□□□□ 0.5
Best1O88870 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Best1O88870 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Best1O88870 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.15■□□□□ 0.5
Best1O88870 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC18.15■□□□□ 0.5
Best1O88870 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Best1O88870 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.14■□□□□ 0.49
Best1O88870 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC18.14■□□□□ 0.49
Best1O88870 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.14■□□□□ 0.49
Best1O88870 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.14■□□□□ 0.49
Best1O88870 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Best1O88870 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.13■□□□□ 0.49
Best1O88870 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Best1O88870 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.12■□□□□ 0.49
Best1O88870 Gm27011-201ENSMUST00000182352 972 ntBASIC18.12■□□□□ 0.49
Best1O88870 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC18.12■□□□□ 0.49
Best1O88870 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.12■□□□□ 0.49
Best1O88870 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Best1O88870 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC18.11■□□□□ 0.49
Best1O88870 Gm12527-201ENSMUST00000117967 564 ntBASIC18.11■□□□□ 0.49
Best1O88870 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC18.11■□□□□ 0.49
Best1O88870 Gm20049-201ENSMUST00000219950 730 ntBASIC18.11■□□□□ 0.49
Best1O88870 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Best1O88870 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.1■□□□□ 0.49
Best1O88870 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Best1O88870 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms