Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim3O70209 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim3O70209 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pdlim3O70209 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.04■□□□□ 0.32
Pdlim3O70209 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pdlim3O70209 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Pdlim3O70209 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.03■□□□□ 0.32
Pdlim3O70209 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.03■□□□□ 0.32
Pdlim3O70209 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC17.03■□□□□ 0.32
Pdlim3O70209 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pdlim3O70209 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
Pdlim3O70209 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pdlim3O70209 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC17.02■□□□□ 0.32
Pdlim3O70209 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
Pdlim3O70209 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Pdlim3O70209 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pdlim3O70209 AC093043.1-201ENSMUST00000226700 898 ntBASIC17.02■□□□□ 0.32
Pdlim3O70209 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Pdlim3O70209 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim3O70209 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim3O70209 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim3O70209 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim3O70209 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pdlim3O70209 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
Pdlim3O70209 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim3O70209 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.01■□□□□ 0.31
Pdlim3O70209 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim3O70209 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pdlim3O70209 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
Pdlim3O70209 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Pdlim3O70209 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17■□□□□ 0.31
Pdlim3O70209 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC17■□□□□ 0.31
Pdlim3O70209 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC17■□□□□ 0.31
Pdlim3O70209 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Golgb1-201ENSMUST00000023534 498 ntBASIC17■□□□□ 0.31
Pdlim3O70209 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Pdlim3O70209 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Pdlim3O70209 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pdlim3O70209 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.99■□□□□ 0.31
Pdlim3O70209 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Pdlim3O70209 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Pdlim3O70209 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.98■□□□□ 0.31
Pdlim3O70209 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
Pdlim3O70209 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Pdlim3O70209 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
Pdlim3O70209 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC16.98■□□□□ 0.31
Pdlim3O70209 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms