Protein–RNA interactions for Protein: O55229

Chkb, Choline/ethanolamine kinase, mousemouse

Predictions only

Length 394 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkbO55229 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.99■□□□□ 0.79
ChkbO55229 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.99■□□□□ 0.79
ChkbO55229 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ChkbO55229 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkbO55229 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.99■□□□□ 0.79
ChkbO55229 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ChkbO55229 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkbO55229 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ChkbO55229 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.98■□□□□ 0.79
ChkbO55229 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
ChkbO55229 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.98■□□□□ 0.79
ChkbO55229 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ChkbO55229 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
ChkbO55229 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.98■□□□□ 0.79
ChkbO55229 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Grk6-206ENSMUST00000224995 2971 ntBASIC19.97■□□□□ 0.79
ChkbO55229 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.97■□□□□ 0.79
ChkbO55229 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
ChkbO55229 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.97■□□□□ 0.79
ChkbO55229 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
ChkbO55229 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ChkbO55229 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.96■□□□□ 0.79
ChkbO55229 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.96■□□□□ 0.79
ChkbO55229 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ChkbO55229 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ChkbO55229 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ChkbO55229 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ChkbO55229 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.95■□□□□ 0.78
ChkbO55229 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.95■□□□□ 0.78
ChkbO55229 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ChkbO55229 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.95■□□□□ 0.78
ChkbO55229 Mir7075-201ENSMUST00000184187 82 ntBASIC19.95■□□□□ 0.78
ChkbO55229 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.95■□□□□ 0.78
ChkbO55229 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ChkbO55229 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ChkbO55229 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.95■□□□□ 0.78
ChkbO55229 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Gm9885-202ENSMUST00000186234 2209 ntBASIC19.95■□□□□ 0.78
ChkbO55229 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
ChkbO55229 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC19.94■□□□□ 0.78
ChkbO55229 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ChkbO55229 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ChkbO55229 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.94■□□□□ 0.78
ChkbO55229 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.94■□□□□ 0.78
ChkbO55229 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
ChkbO55229 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.94■□□□□ 0.78
ChkbO55229 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ChkbO55229 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ChkbO55229 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ChkbO55229 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.93■□□□□ 0.78
ChkbO55229 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ChkbO55229 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.93■□□□□ 0.78
ChkbO55229 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC19.93■□□□□ 0.78
ChkbO55229 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ChkbO55229 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.93■□□□□ 0.78
ChkbO55229 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms